Basic Information
Locus ID:
nbisL1-mrna-18711
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000107F_pilon | 3569461 | 3573200 | - | nbisL1-mrna-18711 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 109,671.65 Da | 39.48 | 100.56 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 694 | 909 | 2.3E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 79 | 137 | 2.1E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 248 | 307 | 1.2E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 3.7E-12 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 277 | 596 | 2.12E-52 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 79 | 386 | 9.42E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 686 | 968 | 1.31E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 675 | 775 | 1.0E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 144 | 9.3E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 989 | 6.6E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 245 | 627 | 1.4E-98 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 145 | 244 | 1.4E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 148 | 172 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 246 | 270 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 221 | 245 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 533 | 557 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 95.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 693 | 961 | 6.4E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 101 | 123 | 14.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 248 | 271 | 7.350022 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 972 | 38.435307 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 820 | 832 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 699 | 722 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 970 | 1001 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_021636580.1 | receptor-like protein kinase HSL1 isoform X1 [Hevea brasiliensis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1ZTY2 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G135400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology