Basic Information
Locus ID:
nbisL1-mrna-18699
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like serine threonine-protein kinase At5g57670
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 2195064 | 2199304 | - | nbisL1-mrna-18699 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 81,863.16 Da | 48.14 | 94.77 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 11 | 141 | 8.76239E-10 | - |
| CDD | cd14066 | STKc_IRAK | 408 | 675 | 1.5952E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 405 | 615 | 3.0E-45 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 10 | 140 | 4.8E-7 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 384 | 673 | 1.2E-76 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 10 | 142 | 2.09E-6 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 8 | 143 | 8.2E-7 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 477 | 689 | 4.9E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 371 | 476 | 1.4E-29 | - |
| SMART | SM00220 | serkin_6 | 402 | 696 | 3.6E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 402 | 683 | 37.191513 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 523 | 535 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 408 | 430 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 347 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021636604.1 | probable receptor-like serine/threonine-protein kinase At5g57670 isoform X3 [Hevea brasiliensis] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2L357 | Uncharacterized protein MANES_02G168800 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology