Basic Information
Locus ID:
nbisL1-mrna-18670
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
proline-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 1929516 | 1936258 | - | nbisL1-mrna-18670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.91 | 66,956.90 Da | 50.63 | 93.39 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 313 | 577 | 1.44043E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 308 | 522 | 9.2E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 289 | 578 | 2.6E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 256 | 382 | 4.9E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 384 | 594 | 1.0E-51 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 307 | 582 | 34.039631 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 313 | 335 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 428 | 440 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55200.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021654284.1 | probable serine/threonine-protein kinase PBL7 [Hevea brasiliensis] | 0 |
| Q9CAL8 | Proline-rich receptor-like protein kinase PERK13 OS=Arabidopsis thaliana OX=3702 GN=PERK13 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3N7F0K9 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G185500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg10465, jg10466, jg12028, jg12030 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000032379 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30038690, pistato.v30038710 |
| Apiaceae | Apium graveolens | 1 | Ag4G01290 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G020680, COCNU_03G014660 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103722203, gene-LOC120113028 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2921.V1.1, AsparagusV1_04.2922.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G07857 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1901 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl03G2048, Cgl03G2049 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5277 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.794 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00023063, Pov_00037875, Pov_00037878 |
| Poaceae | Echinochloa crus-galli | 5 | AH02.4090, AH02.4091, BH02.4102, CH02.4134, CH02.4135 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0042150, gene-QOZ80_1BG0091970 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0307340.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_056800, gene-QYE76_056950 |
| Poaceae | Oryza coarctata | 2 | Oco01G026600, Oco02G027630 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g65940.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G358300 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr03G021410, Chr08G020760 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G648400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG058050, gene_TRIDC3BG065030 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G407500.2, TraesCS3B02G440700.2 ... |
| Poaceae | Zea mays | 1 | Zm00001eb145720_P002 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-28552, nbis-gene-55780 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_7_RagTag.1169, evm.TU.Scaffold_7_RagTag.1170 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-18670 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-19448 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-13155 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.391 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00011718, Maker00012037 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8909 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18382 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132627208, gene-LOC132628899 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107017447 |