Basic Information
Locus ID:
nbisL1-mrna-18637
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000107F_pilon | 3150051 | 3155416 | - | nbisL1-mrna-18637 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 12,704.58 Da | 41.22 | 100.09 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 67 | 9.8E-8 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039066576.1 | probable receptor-like protein kinase At2g42960 [Hibiscus syriacus] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | V4SRF7 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10031290mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 6 | Ag1G02048, Ag1G02049, Ag5G00954, Ag5G01786, Ag8G01819 ... |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.1113.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB06g054260.2N |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.811 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-18637 |
| Salicaceae | Populus euphratica | 2 | populus_peu13163, populus_peu22331 |