Basic Information
Locus ID:
nbisL1-mrna-18634
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 1599759 | 1601879 | + | nbisL1-mrna-18634 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.06 | 75,812.43 Da | 45.93 | 86.12 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 32 | 261 | 1.40954E-69 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 374 | 639 | 3.62695E-89 | - |
| Pfam | PF00139 | Legume lectin domain | 32 | 263 | 5.1E-54 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 372 | 634 | 7.0E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 350 | 637 | 2.83E-74 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 27 | 261 | 1.21E-52 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 643 | 1.8E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 329 | 445 | 5.5E-26 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 18 | 271 | 1.7E-59 | - |
| SMART | SM00220 | serkin_6 | 368 | 638 | 3.8E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 368 | 648 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 492 | 504 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 374 | 396 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 146 | 152 | - | IPR019825 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_015579036.2 | L-type lectin-domain containing receptor kinase S.6 [Ricinus communis] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | B9H7Q0 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G189500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology