Basic Information
Locus ID:
nbisL1-mrna-18598
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000107F_pilon | 2906334 | 2908321 | - | nbisL1-mrna-18598 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.34 | 24,149.21 Da | 58.55 | 69.41 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 185 | 221 | 9.59079E-18 | - |
| Pfam | PF01849 | NAC domain | 78 | 133 | 1.4E-21 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 183 | 221 | 2.7E-12 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 183 | 220 | 2.7E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 84 | 137 | 6.7E-31 | IPR038187 |
| SMART | SM01407 | NAC_2 | 78 | 134 | 3.3E-24 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 75 | 140 | 17.478951 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 86 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 183 | - | - |
| Coils | Coil | Coil | 42 | 62 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49470.1 | nascent polypeptide-associated complex subunit alpha-like protein 2. | 0 |
| RefSeq | XP_034907961.1 | nascent polypeptide-associated complex subunit alpha-like protein 2 [Populus alba] | 0 |
| Q94JX9 | Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At3g49470 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2MEA3 | Uncharacterized protein MANES_01G043900 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology