Basic Information
Locus ID:
nbisL1-mrna-18579
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 10188667 | 10192122 | + | nbisL1-mrna-18579 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 125,715.47 Da | 41.74 | 80.89 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 492 | 737 | 1.28942E-135 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 878 | 1141 | 2.4E-126 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 520 | 653 | 2.8E-28 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 513 | 654 | 2.15E-17 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 488 | 735 | 1.0E-55 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 396 | 1143 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 517 | 746 | 32.362331 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 441 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 85 | - | - |
| Coils | Coil | Coil | 351 | 371 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_021650247.1 | translocase of chloroplast 120, chloroplastic-like [Hevea brasiliensis] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LUB9 | Protein translocase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology