Basic Information
Locus ID:
nbisL1-mrna-18577
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 1210391 | 1212937 | - | nbisL1-mrna-18577 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 62,847.34 Da | 33.33 | 83.71 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 47 | 418 | 3.9E-42 | IPR024788 |
| Gene3D | G3DSA:2.60.120.430 | - | 44 | 205 | 4.2E-23 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 234 | 420 | 2.0E-29 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021668849.1 | - | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MV55 | Kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0477 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl08G0421, Cgl08G0438 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.44165.1 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-18577, nbisL1-mrna-18580 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21413 |