Basic Information
Locus ID:
nbisL1-mrna-1855
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Monogalactosyldiacylglycerol synthase 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 5398033 | 5400720 | + | nbisL1-mrna-1855 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 52,396.86 Da | 35.31 | 87.69 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17507 | GT28_Beta-DGS-like | 71 | 446 | 5.14213E-136 | - |
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 82 | 250 | 1.1E-60 | IPR009695 |
| Pfam | PF04101 | Glycosyltransferase family 28 C-terminal domain | 294 | 414 | 1.1E-10 | IPR007235 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 71 | 448 | 3.14E-25 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 258 | 431 | 6.7E-29 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20410.1 | monogalactosyldiacylglycerol synthase 2. Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation. | 0 |
| RefSeq | XP_002530758.2 | monogalactosyldiacylglycerol synthase 2, chloroplastic [Ricinus communis] | 0 |
| O82730 | Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MGD2 PE=1 SV=1 | 0 | |
| TrEMBL | B9SXN9 | monogalactosyldiacylglycerol synthase OS=Ricinus communis OX=3988 GN=RCOM_0003390 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology