halophFGD

Basic Information

Locus ID: nbisL1-mrna-1855

Species & Taxonomic ID: Ceriops zippeliana & 413951

Genome Assembly: GCA_037897445.1

Description: serine threonine-protein kinase HT1-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
000017F_pilon	5756941	5758387	+	nbisL1-mrna-1855

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.65	9,872.04 Da	57.66	46.70	-0.58

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	5	52	5.0E-8	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	2	51	1.16E-8	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	71	1.3E-12	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G62400.1	Protein kinase superfamily protein.
RefSeq	XP_011044309.1	PREDICTED: serine/threonine-protein kinase HT1-like [Populus euphratica]
Swiss-Prot	Q2MHE4	Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1
TrEMBL	A0A6M2F1Q6	Protein kinase domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg20458
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-1855
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-1465