Basic Information
Locus ID:
nbisL1-mrna-18530
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 806796 | 816323 | - | nbisL1-mrna-18530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 191,563.66 Da | 45.19 | 80.33 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1424 | 1684 | 7.97375E-143 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 261 | 476 | 1.1E-18 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1462 | 1628 | 8.5E-34 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1631 | 1682 | 6.1E-8 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1422 | 1684 | 1.24E-78 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 322 | 486 | 4.19E-27 | IPR027409 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 321 | 487 | 4.5E-35 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1545 | 1685 | 1.4E-40 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1407 | 1543 | 1.9E-35 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1404 | 1685 | 2.8E-92 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1350 | 1684 | 56.993973 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1107 | 1129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 241 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_021667231.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X1 [Hevea brasiliensis] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P2ME17 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology