Basic Information
Locus ID:
nbisL1-mrna-1853
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001711F_pilon | 2293854 | 2294738 | + | nbisL1-mrna-1853 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 22,930.11 Da | 71.83 | 41.04 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021655263.1 | kinesin-like protein KIN-8B [Hevea brasiliensis] | 0 |
| TrEMBL | A0A6A6L6M3 | Kinesin-like protein OS=Hevea brasiliensis OX=3981 GN=GH714_033707 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg19607 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_23667 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00010372 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30204340 |
| Apiaceae | Apium graveolens | 1 | Ag4G01186 |
| Arecaceae | Cocos nucifera | 1 | scaffold012196G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103705708 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.720.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G00939 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G49650.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10010126m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g12430.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB06g010150.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0412 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g14200 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0104s00013.v1.0, Dusal.0430s00008.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g31680 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.2636 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00024141 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb4G24625, Lb8G36215 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.60, BH01.581, CH01.558 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0513780.1 |
| Poaceae | Oryza coarctata | 2 | Oco05G024820, Oco06G025740 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g56260.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G065000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0106938, Pt_Chr0107413 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr04G029640, Chr07G028720 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G642900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG059140, gene_TRIDC5BG063320 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G407400.1, TraesCS5B02G412300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb059040_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-10762, nbis-gene-16328 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2672, Zma_g378 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.966, evm.TU.LG15.886 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g26810 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.1161 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-813 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-17637 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-2414 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000019l.543 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00002045 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-6172 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-1852, nbisL1-mrna-1853 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132621755 |
| Solanaceae | Solanum chilense | 1 | SOLCI004025100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011468 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_15585 |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G0296 |