Basic Information
Locus ID:
nbisL1-mrna-18493
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001606F_pilon | 1222121 | 1231382 | + | nbisL1-mrna-18493 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 176,807.75 Da | 43.23 | 80.23 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 259 | 523 | 9.02472E-103 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1293 | 1553 | 1.60898E-142 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 260 | 514 | 2.1E-25 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1331 | 1496 | 4.5E-35 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1292 | 1553 | 1.57E-79 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 321 | 489 | 2.07E-29 | IPR027409 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 320 | 489 | 1.1E-36 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1277 | 1412 | 7.7E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1415 | 1554 | 9.3E-42 | - |
| SMART | SM00330 | PIPK_2 | 1265 | 1554 | 9.1E-97 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1223 | 1553 | 56.532539 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 174 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_024446686.2 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Populus trichocarpa] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P2ME17 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology