Basic Information
Locus ID:
nbisL1-mrna-18491
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Short Name:
CDPK9
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 578642 | 582103 | + | nbisL1-mrna-18491 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 44,863.92 Da | 30.05 | 86.92 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 1 | 230 | 9.06359E-112 | - |
| CDD | cd00051 | EFh | 278 | 362 | 1.28992E-15 | IPR002048 |
| Pfam | PF00036 | EF hand | 278 | 305 | 1.3E-7 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 2 | 231 | 3.6E-57 | IPR000719 |
| Pfam | PF00036 | EF hand | 337 | 363 | 7.0E-8 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 251 | 1.17E-66 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 266 | 362 | 2.66E-25 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 335 | 393 | 6.5E-9 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 239 | 334 | 2.4E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 34 | 1.4E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 35 | 238 | 2.0E-56 | - |
| SMART | SM00220 | serkin_6 | 1 | 231 | 2.4E-61 | IPR000719 |
| SMART | SM00054 | efh_1 | 336 | 364 | 1.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 278 | 306 | 2.0E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 332 | 367 | 13.118635 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 274 | 309 | 15.657116 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 231 | 41.149033 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 69 | 81 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 287 | 299 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 345 | 357 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G35670.1 | calcium-dependent protein kinase 2. Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4. | 0 |
| RefSeq | XP_030532020.1 | calcium-dependent protein kinase 11 [Rhodamnia argentea] | 0 |
| Q39016 | Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana OX=3702 GN=CPK11 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2KN03 | Uncharacterized protein MANES_18G101000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah033093, Ah036874 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl68967 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000004643, gene:ENSEOMG00000006606 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.3BG0009830, CQ.Regalona.r1.7BG0018650 ... |
| Apiaceae | Apium graveolens | 2 | Ag2G01810, Ag8G00088 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.1311.V1.1 |
| Brassicaceae | Brassica nigra | 2 | BniB01g043470.2N, BniB03g056960.2N |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1650 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.915 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00032026 |
| Poaceae | Echinochloa crus-galli | 1 | CH04.446 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G003830 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G027700 |
| Poaceae | Zea mays | 2 | Zm00001eb015740_P001, Zm00001eb168390_P001 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-18442, nbisL1-mrna-18491 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-5501 |
| Zosteraceae | Zostera marina | 1 | Zosma03g22750.v3.1 |