Basic Information
Locus ID:
nbisL1-mrna-18475
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
translocase of chloroplast 159
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000107F_pilon | 2179743 | 2183297 | - | nbisL1-mrna-18475 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 128,277.29 Da | 40.72 | 79.74 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 509 | 762 | 3.1055E-122 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 907 | 1171 | 2.3E-123 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 540 | 674 | 6.1E-22 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 533 | 697 | 2.3E-13 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 516 | 770 | 3.9E-54 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 426 | 1184 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 537 | 771 | 28.203688 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 468 | - | - |
| Coils | Coil | Coil | 260 | 280 | - | - |
| Coils | Coil | Coil | 460 | 480 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_021637087.1 | translocase of chloroplast 159, chloroplastic-like [Hevea brasiliensis] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MRB4 | AIG1-type G domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology