Basic Information
Locus ID:
nbisL1-mrna-18468
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001606F_pilon | 1035435 | 1037405 | - | nbisL1-mrna-18468 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 19,120.67 Da | 52.42 | 78.12 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 21 | 86 | 1.1E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 83 | 2.7E-18 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 36 | 165 | 5.6E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 170 | 14.577114 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 50 | 62 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50860.2 | - | 0 |
| RefSeq | XP_002300908.3 | probable serine/threonine-protein kinase At1g54610 [Populus trichocarpa] | 0 |
| Q9ZVM9 | Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana OX=3702 GN=At1g54610 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5NI44 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_046790 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg16965, jg39448 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.3358.V1.1 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.341 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011983 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-20313 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18468 |