Basic Information
Locus ID:
nbisL1-mrna-18412
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001606F_pilon | 690738 | 692849 | - | nbisL1-mrna-18412 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.14 | 76,138.75 Da | 41.80 | 84.13 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 373 | 638 | 3.28578E-87 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 25 | 260 | 3.73541E-70 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 369 | 574 | 1.4E-41 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 31 | 262 | 1.9E-51 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 25 | 261 | 1.35E-50 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 635 | 2.43E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 445 | 642 | 3.9E-58 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 17 | 267 | 5.1E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 444 | 2.5E-26 | - |
| SMART | SM00220 | serkin_6 | 367 | 637 | 1.2E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 367 | 647 | 35.580238 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 145 | 151 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 491 | 503 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 373 | 395 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 658 | 685 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021652120.1 | L-type lectin-domain containing receptor kinase S.6 [Hevea brasiliensis] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9U1W1 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_18G089500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology