Basic Information
Locus ID:
nbisL1-mrna-18379
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 8785908 | 8788592 | + | nbisL1-mrna-18379 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 99,881.06 Da | 36.17 | 84.41 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 544 | 809 | 1.45466E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 543 | 808 | 7.6E-49 | IPR001245 |
| Pfam | PF12819 | Malectin-like domain | 40 | 416 | 4.1E-35 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 522 | 807 | 5.26E-77 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 235 | 418 | 1.1E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 505 | 614 | 9.1E-36 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 37 | 206 | 3.6E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 615 | 838 | 1.8E-59 | - |
| SMART | SM00220 | serkin_6 | 538 | 811 | 1.3E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 538 | 811 | 36.880566 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 544 | 567 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 659 | 671 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 444 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021670698.1 | receptor-like protein kinase FERONIA [Hevea brasiliensis] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9WBL3 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_02G057000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 7 | nbisL1-mrna-15250, nbisL1-mrna-15253, nbisL1-mrna-15254 ... |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12685 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.97 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-18379, nbisL1-mrna-21419 |