Basic Information
Locus ID:
nbisL1-mrna-18374
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
ATMRK1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000107F_pilon | 1552004 | 1554467 | + | nbisL1-mrna-18374 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 44,808.66 Da | 34.97 | 77.81 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 100 | 372 | 3.56492E-111 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 98 | 371 | 4.2E-58 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 79 | 372 | 3.42E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 83 | 175 | 1.6E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 198 | 383 | 1.2E-59 | - |
| SMART | SM00220 | serkin_6 | 94 | 375 | 1.6E-59 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 8 | 381 | 2.8E-55 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 94 | 375 | 40.244457 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 239 | 251 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 343 | 365 | 9.3E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 195 | 208 | 9.3E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 233 | 251 | 9.3E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 299 | 321 | 9.3E-16 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021680535.1 | serine/threonine-protein kinase HT1-like [Hevea brasiliensis] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2J5F5 | Uncharacterized protein MANES_05G078400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology