Basic Information
Locus ID:
nbisL1-mrna-1836
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 18035061 | 18037360 | - | nbisL1-mrna-1836 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 37,778.06 Da | 43.12 | 91.21 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13456 | Reverse transcriptase-like | 262 | 301 | 9.3E-7 | IPR002156 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 94 | 230 | 7.1E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 41 | 232 | 2.16E-35 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 132 | 240 | 5.3E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 34 | 129 | 4.2E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 5 | 340 | 17.474585 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_007030932.2 | - | 0 |
| Q8LGB6 | Non-functional pseudokinase ZED1 OS=Arabidopsis thaliana OX=3702 GN=ZED1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K7A8 | Non-functional pseudokinase ZED1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology