Basic Information
Locus ID:
nbisL1-mrna-18257
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Cytosolic domain of 10TM putative phosphate transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002187F_pilon | 1278134 | 1284361 | - | nbisL1-mrna-18257 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 81,151.66 Da | 42.79 | 109.57 | 0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 171 | 5.9E-40 | IPR032880 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 361 | 625 | 2.1E-72 | IPR003864 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 192 | 347 | 4.2E-29 | IPR027815 |
| Coils | Coil | Coil | 279 | 299 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01100.1 | hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it | 0 |
| RefSeq | XP_021682269.1 | CSC1-like protein HYP1 isoform X1 [Hevea brasiliensis] | 0 |
| Q8GUH7 | CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1 | 0 | |
| TrEMBL | B9SVJ7 | CSC1-like protein HYP1 OS=Ricinus communis OX=3988 GN=RCOM_0538000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology