Basic Information
Locus ID:
nbisL1-mrna-18207
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 34280676 | 34288300 | + | nbisL1-mrna-18207 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 117,343.15 Da | 51.98 | 80.72 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 432 | 765 | 3.7E-101 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 41 | 139 | 8.9E-7 | IPR001715 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 426 | 805 | 1.03E-117 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 40 | 137 | 1.09E-13 | IPR036872 |
| Gene3D | G3DSA:1.10.418.10 | - | 36 | 143 | 3.9E-11 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 368 | 769 | 1.8E-127 | IPR036961 |
| SMART | SM00033 | ch_5 | 39 | 138 | 0.0049 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 424 | 775 | 9.0E-156 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 37 | 140 | 14.500326 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 426 | 767 | 111.736946 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 667 | 678 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 501 | 522 | 6.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 717 | 738 | 6.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 668 | 686 | 6.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 637 | 654 | 6.5E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 846 | 877 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1013 | 1048 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 825 | 877 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 966 | 1056 | - | - |
| Coils | Coil | Coil | 311 | 331 | - | - |
| Coils | Coil | Coil | 233 | 288 | - | - |
| Coils | Coil | Coil | 781 | 811 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_024446862.2 | kinesin-like protein KIN-14J isoform X2 [Populus trichocarpa] | 0 |
| B3H6Z8 | Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JHT8 | Uncharacterized protein MANES_02G021900 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology