Basic Information
Locus ID:
nbisL1-mrna-18162
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
receptor-like serine threonine-protein kinase At5g57670
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000184F_pilon | 3095395 | 3099113 | - | nbisL1-mrna-18162 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 70,629.48 Da | 44.87 | 94.09 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00582 | Universal stress protein family | 19 | 152 | 1.0E-5 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 458 | 528 | 1.3E-12 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 153 | 4.5E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 534 | 8.47E-34 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 18 | 154 | 3.2E-6 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 372 | 458 | 2.3E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 459 | 605 | 4.9E-21 | - |
| SMART | SM00220 | serkin_6 | 401 | 600 | 1.9E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 320 | 652 | 13.78561 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 407 | 429 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 478 | 490 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021657163.1 | probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1 [Hevea brasiliensis] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2L387 | Uncharacterized protein MANES_02G168800 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology