Basic Information
Locus ID:
nbisL1-mrna-18154
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Dual specificity protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 33881158 | 33887149 | + | nbisL1-mrna-18154 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 77,240.62 Da | 48.25 | 79.51 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 87 | 176 | 4.11806E-10 | IPR000014 |
| Pfam | PF00989 | PAS fold | 68 | 173 | 3.2E-10 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 451 | 583 | 5.7E-16 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 585 | 672 | 3.8E-21 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 439 | 681 | 7.65E-47 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 68 | 176 | 2.79E-16 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 559 | 684 | 2.0E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 430 | 482 | 5.6E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 490 | 555 | 5.4E-15 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 64 | 199 | 1.4E-19 | - |
| SMART | SM00091 | pas_2 | 66 | 133 | 1.9E-6 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 69 | 176 | 2.3E-13 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 449 | 693 | 12.499416 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 64 | 135 | 13.773154 | IPR000014 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 434 | - | - |
| Coils | Coil | Coil | 510 | 530 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_012087219.1 | probable serine/threonine-protein kinase DDB_G0278535 [Jatropha curcas] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9WIG9 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology