Basic Information
Locus ID:
nbisL1-mrna-18148
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002187F_pilon | 596738 | 601822 | - | nbisL1-mrna-18148 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 122,992.01 Da | 48.74 | 71.33 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 808 | 1080 | 2.62883E-105 | - |
| CDD | cd06410 | PB1_UP2 | 180 | 275 | 2.3583E-42 | - |
| Pfam | PF00564 | PB1 domain | 192 | 275 | 2.7E-16 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 804 | 1080 | 6.2E-58 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 787 | 1079 | 2.63E-72 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 192 | 280 | 5.69E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 795 | 889 | 2.2E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 890 | 1096 | 5.6E-50 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 195 | 278 | 3.7E-10 | - |
| SMART | SM00666 | PB1_new | 191 | 276 | 6.2E-27 | IPR000270 |
| SMART | SM00220 | serkin_6 | 802 | 1083 | 1.4E-51 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 802 | 1081 | 40.21619 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 927 | 939 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 808 | 833 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_021648742.1 | uncharacterized protein LOC110641358 [Hevea brasiliensis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9W961 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G150500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology