Basic Information
Locus ID:
nbisL1-mrna-18094
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002187F_pilon | 280071 | 283869 | + | nbisL1-mrna-18094 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 75,603.11 Da | 33.73 | 99.83 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 366 | 423 | 2.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 87 | 143 | 1.7E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 321 | 359 | 0.009 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 59 | 7.2E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 559 | 656 | 2.9E-5 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 558 | 666 | 3.77E-12 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 310 | 3.81E-41 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 323 | 435 | 5.61E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 321 | 445 | 2.0E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 523 | 678 | 3.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 320 | 6.2E-67 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 386 | 409 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 182 | 205 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 108 | 131 | 7.6E-5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 410 | 433 | 79.0 | IPR003591 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_050237128.1 | receptor-like kinase TMK4 [Mercurialis annua] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9WI57 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G056800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology