Basic Information
Locus ID:
nbisL1-mrna-18028
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002200F_pilon | 1427525 | 1428909 | + | nbisL1-mrna-18028 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.12 | 39,045.21 Da | 37.90 | 89.91 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 77 | 336 | 1.6E-34 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 336 | 9.7E-59 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 33 | 129 | 5.8E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 131 | 341 | 8.9E-47 | - |
| PIRSF | PIRSF000654 | ILK | 23 | 273 | 7.3E-26 | - |
| PIRSF | PIRSF000654 | ILK | 299 | 347 | 0.2 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 339 | 30.760544 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_038718212.1 | non-functional pseudokinase ZED1-like [Tripterygium wilfordii] | 0 |
| Q8LGB6 | Non-functional pseudokinase ZED1 OS=Arabidopsis thaliana OX=3702 GN=ZED1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835D6M0 | Protein kinase domain-containing protein OS=Tetracentron sinense OX=13715 GN=HHK36_022276 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology