Basic Information
Locus ID:
nbisL1-mrna-1802
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 5808711 | 5813796 | - | nbisL1-mrna-1802 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 85,909.43 Da | 52.77 | 78.06 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 13 | 167 | 2.68307E-57 | - |
| Pfam | PF00069 | Protein kinase domain | 464 | 714 | 1.8E-38 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 12 | 153 | 4.5E-10 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 12 | 142 | 1.51E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 441 | 720 | 6.97E-68 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 11 | 164 | 8.2E-13 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 440 | 533 | 4.0E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 534 | 736 | 1.7E-48 | - |
| SMART | SM00220 | serkin_6 | 461 | 727 | 5.7E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 461 | 724 | 34.817001 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 579 | 591 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 739 | 775 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 775 | - | - |
| Coils | Coil | Coil | 327 | 354 | - | - |
| Coils | Coil | Coil | 365 | 424 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_048329704.1 | U-box domain-containing protein 35-like [Ziziphus jujuba var. spinosa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A835J6M0 | Protein kinase domain-containing protein OS=Salix dunnii OX=1413687 GN=SADUNF_Sadunf18G0112200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology