Basic Information
Locus ID:
nbisL1-mrna-1802
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000017F_pilon | 5493504 | 5497001 | - | nbisL1-mrna-1802 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 62,449.85 Da | 32.56 | 84.87 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 67 | 325 | 6.30788E-134 | - |
| CDD | cd00051 | EFh | 445 | 507 | 1.24836E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 444 | 507 | 2.5E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 372 | 433 | 3.8E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 70 | 326 | 1.5E-75 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 54 | 346 | 1.75E-86 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 354 | 533 | 8.7E-46 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 69 | 153 | 1.4E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 334 | 1.0E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 335 | 510 | 1.4E-52 | - |
| SMART | SM00054 | efh_1 | 445 | 473 | 0.19 | IPR002048 |
| SMART | SM00054 | efh_1 | 373 | 401 | 4.2E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 481 | 509 | 4.2E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 68 | 326 | 6.7E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 409 | 437 | 0.0032 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 477 | 512 | 14.736568 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 441 | 476 | 13.704439 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 369 | 404 | 12.979158 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 405 | 440 | 9.603815 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 68 | 326 | 48.272568 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 188 | 200 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 74 | 97 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 418 | 430 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 382 | 394 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 490 | 502 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_021679214.1 | calcium-dependent protein kinase 10-like [Hevea brasiliensis] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067K856 | Calcium-dependent protein kinase 30 OS=Jatropha curcas OX=180498 GN=JCGZ_11569 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology