Basic Information
Locus ID:
nbisL1-mrna-17932
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002200F_pilon | 536081 | 537990 | + | nbisL1-mrna-17932 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 55,388.93 Da | 41.08 | 86.85 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 136 | 295 | 1.53E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 60 | 2.62E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 48 | 4.2E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 56 | 270 | 1.2E-10 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59240.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_021681777.1 | F-box/LRR-repeat protein At2g42730-like isoform X2 [Hevea brasiliensis] | 0 |
| Q9LX47 | Putative F-box/FBD/LRR-repeat protein At3g59240 OS=Arabidopsis thaliana OX=3702 GN=At3g59240 PE=4 SV=1 | 0 | |
| TrEMBL | A0A6A6NBI6 | F-box domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_035945 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology