Basic Information
Locus ID:
nbisL1-mrna-17868
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 30621243 | 30623673 | + | nbisL1-mrna-17868 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.24 | 24,556.51 Da | 54.28 | 101.11 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 17 | 56 | 2.4E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 71 | 2.22E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 60 | 2.1E-5 | - |
| SMART | SM00256 | fbox_2 | 21 | 61 | 0.0012 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 68 | 10.424773 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78760.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_024629459.1 | - | 0 |
| Q9ZV94 | Putative F-box/FBD/LRR-repeat protein At1g78760 OS=Arabidopsis thaliana OX=3702 GN=At1g78760 PE=4 SV=1 | 0 | |
| TrEMBL | G7LH07 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology