Basic Information
Locus ID:
nbisL1-mrna-17858
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000022F_pilon | 1729543 | 1730372 | - | nbisL1-mrna-17858 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 20,338.30 Da | 39.44 | 86.85 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 74 | 107 | 3.9E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 66 | 121 | 6.67E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 65 | 142 | 4.5E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 72 | 117 | 9.232525 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26930.2 | - | 0 |
| RefSeq | XP_020413618.1 | FBD-associated F-box protein At5g38590 [Prunus persica] | 0 |
| TrEMBL | A0A2P2Q499 | F-box domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology