Basic Information
Locus ID:
nbisL1-mrna-17855
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Nascent polypeptide-associated complex subunit alpha-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000184F_pilon | 1209190 | 1209673 | + | nbisL1-mrna-17855 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.54 | 13,612.40 Da | 32.26 | 93.57 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 80 | 125 | 8.10796E-20 | - |
| Pfam | PF01849 | NAC domain | 1 | 43 | 6.8E-12 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 86 | 125 | 3.3E-13 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 87 | 124 | 3.4E-20 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 1 | 47 | 1.7E-22 | IPR038187 |
| SMART | SM01407 | NAC_2 | 1 | 44 | 4.4E-8 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 1 | 50 | 10.135243 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 83 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_031097896.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Ipomoea triloba] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K4S9 | Uncharacterized protein MANES_11G009600 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology