Basic Information
Locus ID:
nbisL1-mrna-1783
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Short Name:
CPK24
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 17679050 | 17681517 | - | nbisL1-mrna-1783 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 57,693.15 Da | 38.10 | 81.30 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 55 | 309 | 3.65595E-132 | - |
| CDD | cd00051 | EFh | 405 | 468 | 1.63962E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 405 | 468 | 1.8E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 56 | 310 | 1.2E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 333 | 394 | 1.5E-9 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 53 | 310 | 2.02E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 322 | 469 | 8.37E-40 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 397 | 503 | 5.6E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 58 | 141 | 1.2E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 313 | 396 | 5.6E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 142 | 312 | 8.4E-56 | - |
| SMART | SM00054 | efh_1 | 333 | 361 | 0.0025 | IPR002048 |
| SMART | SM00054 | efh_1 | 369 | 397 | 0.11 | IPR002048 |
| SMART | SM00054 | efh_1 | 405 | 433 | 1.8E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 442 | 470 | 4.9E-4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 56 | 317 | 3.3E-96 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 365 | 400 | 9.743292 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 317 | 48.498714 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 329 | 364 | 14.42972 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 438 | 473 | 13.230217 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 401 | 436 | 13.09074 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 451 | 463 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 62 | 85 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 378 | 390 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 176 | 188 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 414 | 426 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 342 | 354 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_002533526.1 | calcium-dependent protein kinase 24 [Ricinus communis] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | B9T5K7 | Calcium-dependent protein kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_1008260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology