Basic Information
Locus ID:
nbisL1-mrna-17800
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
protein kinase kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 29985514 | 29993655 | - | nbisL1-mrna-17800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 35,961.88 Da | 50.30 | 92.29 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 50 | 317 | 1.86181E-115 | - |
| Pfam | PF00069 | Protein kinase domain | 53 | 315 | 1.3E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 50 | 317 | 2.29E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 40 | 131 | 4.0E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 132 | 321 | 3.0E-48 | - |
| SMART | SM00220 | serkin_6 | 52 | 315 | 2.4E-78 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 52 | 315 | 43.170197 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 170 | 182 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 58 | 81 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32320.1 | MAP kinase kinase 10. member of MAP Kinase Kinase | 0 |
| RefSeq | XP_021644175.1 | mitogen-activated protein kinase kinase 10 [Hevea brasiliensis] | 0 |
| Q9LQM8 | Mitogen-activated protein kinase kinase 10 OS=Arabidopsis thaliana OX=3702 GN=MKK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6M8G2 | Protein kinase domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_014230 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology