Basic Information
Locus ID:
nbisL1-mrna-17705
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000184F_pilon | 289180 | 293109 | - | nbisL1-mrna-17705 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 45,278.61 Da | 49.29 | 107.41 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 116 | 307 | 3.7E-23 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 313 | 387 | 1.8E-13 | IPR027470 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 311 | 389 | 4.71E-17 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 107 | 309 | 4.45E-37 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 311 | 403 | 6.7E-18 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 110 | 307 | 7.7E-37 | IPR027469 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 111 | 387 | 2.4E-34 | IPR002524 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58060.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_021593345.1 | metal tolerance protein 4 [Manihot esculenta] | 0 |
| Q10PP8 | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MTI0 | Uncharacterized protein MANES_15G105000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology