Basic Information
Locus ID:
nbisL1-mrna-17653
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
DNAJ heat shock N-terminal domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000022F_pilon | 416387 | 418777 | + | nbisL1-mrna-17653 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.12 | 89,052.29 Da | 39.23 | 59.91 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 1.61462E-20 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 1.7E-21 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 496 | 704 | 6.2E-79 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 63 | 141 | 2.49E-22 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 63 | 175 | 5.7E-25 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 8.8E-23 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 18.333832 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 3.8E-13 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 3.8E-13 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 3.8E-13 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 122 | 141 | 3.8E-13 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 493 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 756 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 324 | - | - |
| Coils | Coil | Coil | 298 | 325 | - | - |
| Coils | Coil | Coil | 772 | 792 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25560.1 | DNAJ heat shock N-terminal domain-containing protein. | 0 |
| RefSeq | XP_044489560.1 | uncharacterized protein LOC123213969 [Mangifera indica] | 0 |
| O89114 | DnaJ homolog subfamily B member 5 OS=Mus musculus OX=10090 GN=Dnajb5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2KPD8 | J domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology