Basic Information
Locus ID:
nbisL1-mrna-17625
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 8030599 | 8032899 | + | nbisL1-mrna-17625 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 85,756.41 Da | 40.34 | 64.30 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 67 | 120 | 1.62554E-19 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 482 | 689 | 7.9E-74 | IPR024593 |
| Pfam | PF00226 | DnaJ domain | 67 | 128 | 1.3E-19 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 63 | 127 | 1.31E-22 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 54 | 150 | 2.7E-22 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 66 | 123 | 1.0E-18 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 67 | 131 | 16.736351 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 108 | 127 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 103 | 123 | 1.1E-9 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 87 | 102 | 1.1E-9 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 69 | 87 | 1.1E-9 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 265 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_012090104.1 | uncharacterized protein LOC105648353 [Jatropha curcas] | 0 |
| O89114 | DnaJ homolog subfamily B member 5 OS=Mus musculus OX=10090 GN=Dnajb5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067JEB4 | J domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_25993 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology