Basic Information
Locus ID:
nbisL1-mrna-17589
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000066F_pilon | 1948949 | 1952754 | + | nbisL1-mrna-17589 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 101,939.18 Da | 38.11 | 88.66 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 598 | 871 | 2.30808E-99 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 337 | 372 | 0.0053 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 68 | 8.1E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 595 | 868 | 1.3E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 567 | 879 | 1.14E-81 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 443 | 2.55E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 334 | 459 | 4.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 556 | 669 | 3.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 331 | 2.4E-77 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 670 | 884 | 7.8E-60 | - |
| SMART | SM00220 | serkin_6 | 592 | 872 | 1.3E-44 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 289 | 312 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 397 | 421 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 0.036 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 300.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 592 | 872 | 41.120766 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 598 | 620 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 717 | 729 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 911 | 944 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021599366.1 | receptor protein kinase TMK1 [Manihot esculenta] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L8F0 | Receptor protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology