Basic Information
Locus ID:
nbisL1-mrna-17513
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
SEC12-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000066F_pilon | 1207473 | 1212662 | - | nbisL1-mrna-17513 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 43,811.44 Da | 45.55 | 83.79 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 216 | 351 | 2.12E-14 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 103 | 249 | 3.0E-16 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 250 | 379 | 1.9E-20 | IPR015943 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 97 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01470.1 | SEC12P-like 2 protein. Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER. | 0 |
| RefSeq | XP_002526027.1 | SEC12-like protein 2 [Ricinus communis] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A2P2KSL5 | ANAPC4_WD40 domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology