Basic Information
Locus ID:
nbisL1-mrna-17501
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000066F_pilon | 1071438 | 1078556 | - | nbisL1-mrna-17501 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 195,008.80 Da | 50.30 | 72.22 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1477 | 1738 | 7.9029E-145 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 384 | 656 | 7.99727E-130 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 404 | 647 | 4.9E-32 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1516 | 1680 | 1.8E-32 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1471 | 1738 | 2.62E-79 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 450 | 622 | 1.83E-39 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1452 | 1597 | 9.7E-36 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 449 | 622 | 1.9E-50 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1599 | 1739 | 7.1E-40 | - |
| SMART | SM00330 | PIPK_2 | 1452 | 1739 | 5.2E-112 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1420 | 1738 | 58.009125 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1401 | 1422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 349 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 349 | 373 | - | - |
| Coils | Coil | Coil | 1045 | 1065 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_021647628.1 | LOW QUALITY PROTEIN: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Hevea brasiliensis] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MG65 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology