Basic Information
Locus ID:
nbisL1-mrna-17475
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Protein kinase PVPK-1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002180F_pilon | 1350671 | 1355440 | + | nbisL1-mrna-17475 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 74,578.52 Da | 53.92 | 73.90 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 283 | 641 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 285 | 436 | 1.8E-36 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 518 | 621 | 3.3E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 256 | 645 | 4.47E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 368 | 467 | 3.4E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 283 | 367 | 3.4E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 516 | 639 | 6.3E-36 | - |
| SMART | SM00220 | serkin_6 | 284 | 621 | 6.4E-84 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 284 | 621 | 44.272648 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 405 | 417 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G27580.1 | Protein kinase superfamily protein. a member of a subfamily of Ser/Thr PKs in plants. | 0 |
| RefSeq | XP_011003131.1 | PREDICTED: protein kinase PVPK-1 [Populus euphratica] | 0 |
| P15792 | Protein kinase PVPK-1 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2ITM8 | Protein kinase PVPK-1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology