Basic Information
Locus ID:
nbisL1-mrna-17463
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Short Name:
UBP15
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 26786771 | 26799142 | - | nbisL1-mrna-17463 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 91,291.60 Da | 58.91 | 66.26 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 356 | 649 | 1.6E-31 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 387 | 653 | 3.92E-67 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 345 | 659 | 1.9E-71 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 351 | 652 | 37.685658 | IPR028889 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 774 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 670 | 720 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 700 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65450.1 | ubiquitin-specific protease 17. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_021630602.1 | ubiquitin carboxyl-terminal hydrolase 17 isoform X1 [Manihot esculenta] | 0 |
| Q9FKP5 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana OX=3702 GN=UBP17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2JJZ9 | Uncharacterized protein MANES_12G127400 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology