Basic Information
Locus ID:
nbisL1-mrna-1746
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Wall-associated receptor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 17306476 | 17314804 | - | nbisL1-mrna-1746 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.39 | 21,381.79 Da | 32.89 | 53.17 | -0.56 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017617980.1 | - | 0 |
| TrEMBL | A0A2P2MW94 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg23266, jg23268, jg25055 |
| Amaranthaceae | Atriplex hortensis | 6 | Ah005226, Ah005227, Ah005228, Ah005261, Ah005262, Ah005264 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_4g075040, BVRB_4g075090 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg17477 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00007470, GOSA_00007471 |
| Amaranthaceae | Chenopodium quinoa | 11 | CQ.Regalona.r1.3BG0010860, CQ.Regalona.r1.4AG0003620 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30052150 |
| Arecaceae | Cocos nucifera | 1 | COCNU_08G011960 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.187.V1.1 |
| Asteraceae | Flaveria trinervia | 4 | Ftri17G04470, Ftri17G05279, Ftri17G13315, Ftri6G21598 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G16090.1 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G2280 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl03G2029, Cgl07G1270, Cgl08G0276 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.872 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00028280 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G28393 |
| Poaceae | Echinochloa crus-galli | 1 | AH04.670 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9AG0692850 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g46850.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0300641 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2BG009410 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18280 |
| Rhizophoraceae | Bruguiera sexangula | 13 | evm.TU.143.12, evm.TU.143.23, evm.TU.143.26, evm.TU.143.30 ... |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-1742, nbisL1-mrna-1744, nbisL1-mrna-1746 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-73 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000019l.159 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00002221 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21646 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-24795 |
| Salicaceae | Populus euphratica | 3 | populus_peu04143, populus_peu04145, populus_peu38345 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.31588_chr11_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G3095 |