Basic Information
Locus ID:
nbisL1-mrna-17453
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002180F_pilon | 1245905 | 1248971 | - | nbisL1-mrna-17453 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 77,221.72 Da | 39.63 | 83.63 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 45 | 132 | 1.7E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 157 | 242 | 1.8E-11 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 329 | 637 | 2.7E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 308 | 669 | 1.39E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 285 | 400 | 2.1E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 453 | 646 | 2.7E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 37 | 134 | 2.1E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 145 | 245 | 1.7E-12 | IPR038408 |
| SMART | SM00220 | serkin_6 | 325 | 639 | 7.8E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 325 | 653 | 34.152706 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 147 | 245 | 14.397815 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 34 | 134 | 15.031462 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 331 | 353 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 490 | 502 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 679 | 703 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021593519.1 | - | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2K1V8 | Cysteine-rich receptor-like protein kinase 42 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology