Basic Information
Locus ID:
nbisL1-mrna-17450
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Receptor-like cytosolic serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 26641388 | 26646321 | + | nbisL1-mrna-17450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 46,695.44 Da | 40.38 | 84.42 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 243 | 316 | 3.5E-8 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 157 | 242 | 4.8E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 143 | 374 | 1.97E-45 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 134 | 234 | 5.6E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 241 | 387 | 4.9E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 157 | 416 | 11.66551 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 163 | 186 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034932994.1 | receptor-like cytosolic serine/threonine-protein kinase RBK1 [Populus alba] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JTB5 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology