Basic Information
Locus ID:
nbisL1-mrna-17364
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 25758050 | 25760524 | - | nbisL1-mrna-17364 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 43,204.03 Da | 49.60 | 92.60 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 169 | 229 | 1.69016E-7 | - |
| Pfam | PF00651 | BTB/POZ domain | 59 | 163 | 4.8E-10 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 251 | 336 | 1.6E-13 | IPR000197 |
| SUPERFAMILY | SSF54695 | POZ domain | 46 | 197 | 1.15E-13 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 244 | 345 | 4.84E-24 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 168 | 241 | 1.9E-15 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 45 | 162 | 8.5E-17 | IPR011333 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 242 | 365 | 3.6E-24 | IPR035898 |
| SMART | SM00551 | TAZ_2 | 244 | 337 | 4.6E-39 | IPR000197 |
| SMART | SM00225 | BTB_4 | 67 | 167 | 8.0E-10 | IPR000210 |
| ProSiteProfiles | PS50134 | Zinc finger TAZ-type profile. | 241 | 339 | 8.541931 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 67 | 135 | 11.192007 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67480.1 | BTB and TAZ domain protein 4. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves. | 0 |
| RefSeq | XP_006380615.1 | - | 0 |
| Q9FJX5 | BTB/POZ and TAZ domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BT4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YDL1 | BTB/POZ and TAZ domain-containing protein 4 OS=Populus deltoides OX=3696 GN=H0E87_014506 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology