Basic Information
Locus ID:
nbisL1-mrna-17344
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
receptor-like protein kinase At5g15080
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002180F_pilon | 606305 | 611794 | - | nbisL1-mrna-17344 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.43 | 51,746.27 Da | 41.72 | 73.08 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 113 | 391 | 2.68789E-102 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 111 | 388 | 1.4E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 81 | 388 | 1.52E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 91 | 192 | 1.0E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 193 | 407 | 5.6E-62 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 107 | 394 | 38.265697 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 237 | 249 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 113 | 145 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 80 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_024454200.2 | - | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2Z0T3 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_008501 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology