Basic Information
Locus ID:
nbisL1-mrna-17331
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000000F_pilon | 3913435 | 3917751 | + | nbisL1-mrna-17331 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 46,032.09 Da | 36.72 | 81.93 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 140 | 387 | 2.50424E-128 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 134 | 387 | 1.0E-67 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 117 | 387 | 1.75E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 121 | 215 | 1.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 216 | 408 | 7.3E-58 | - |
| SMART | SM00220 | serkin_6 | 133 | 387 | 9.4E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 133 | 395 | 43.099525 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 255 | 267 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 314 | 336 | 2.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 295 | 305 | 2.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 211 | 224 | 2.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 358 | 380 | 2.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 249 | 267 | 2.4E-17 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24360.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_012076278.1 | serine/threonine-protein kinase STY13 [Jatropha curcas] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LSA6 | Serine/threonine-protein kinase HT1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg15283, jg31800, jg32820, jg3755 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_7981 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034061 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g036000 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg20683, Sbi_jg23071 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg16937 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00009246 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl63391, Sgl67870 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000019304, gene:ENSEOMG00000021208 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0012250, CQ.Regalona.r1.2BG0013790 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30252420, pistato.v30283800 |
| Apiaceae | Apium graveolens | 2 | Ag10G02382, Ag4G02526 |
| Arecaceae | Cocos nucifera | 3 | COCNU_01G007690, COCNU_02G019870, COCNU_11G009890 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103701441, gene-LOC103707048, gene-LOC103720897 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.3557.V1.1, AsparagusV1_05.677.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri3G32439, Ftri4G17010, Ftri8G27132 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G24360.1, AT4G31170.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10000160m.g.v1.0, Thhalv10000182m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp4g03360.v2.2, Sp4g03370.v2.2, Sp7g29050.v2.2 |
| Brassicaceae | Brassica nigra | 6 | BniB01g019290.2N, BniB02g022190.2N, BniB02g022220.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq03G2650, Ceq04G2579 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl03G2792, Cgl04G2805 |
| Cymodoceaceae | Cymodocea nodosa | 3 | gene.Cymno02g04480, gene.Cymno04g08730, gene.Cymno05g09460 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0141s00019.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate05g05410, gene.Thate07g06850 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-357 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG07.1642, evm.TU.LG07.635 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00039510 |
| Plumbaginaceae | Limonium bicolor | 4 | Lb3G21110, Lb3G21118, Lb6G30127, Lb6G31030 |
| Poaceae | Echinochloa crus-galli | 6 | AH07.526, AH08.677, BH07.652, BH08.720, CH07.530, CH08.804 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0103210, gene-QOZ80_2BG0156520 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.6HG0570850.1, HORVU.MOREX.r3.7HG0696770.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_020847, gene-QYE76_020890, gene-QYE76_033064 ... |
| Poaceae | Oryza coarctata | 8 | Oco03G003660, Oco04G003590, Oco07G015530, Oco08G014980 ... |
| Poaceae | Oryza sativa | 4 | LOC_Os02g07790.1, LOC_Os04g51950.1, LOC_Os06g45300.2 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_04G054500, gene-BS78_06G222300 ... |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0202388, Pt_Chr0202397, Pt_Chr0402458 |
| Poaceae | Sporobolus alterniflorus | 8 | Chr06G034250, Chr15G025510, Chr16G002860, Chr17G002590 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel6E01G318200, Tel7E01G493300, Tel7E01G827900 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC6AG021710, gene_TRIDC6BG027410 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS6A02G155200.2, TraesCS6B02G183300.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb071280_P001, Zm00001eb171020_P001 ... |
| Poaceae | Zoysia japonica | 6 | nbis-gene-22808, nbis-gene-29846, nbis-gene-33633 ... |
| Poaceae | Zoysia macrostachya | 5 | Zma_g15030, Zma_g20409, Zma_g21942, Zma_g22638, Zma_g23787 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG05.2304, evm.TU.LG07.1072 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g26130 |
| Rhizophoraceae | Bruguiera sexangula | 4 | evm.TU.Scaffold_14_RagTag.1042 ... |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-12821, nbisL1-mrna-16894, nbisL1-mrna-25109 |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-10483, nbisL1-mrna-15928, nbisL1-mrna-5273 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-17331, nbisL1-mrna-5088 |
| Rhizophoraceae | Kandelia candel | 4 | add.evm.TU.utg000033l.2, evm.TU.utg000008l.1385 ... |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00000537, Maker00012299, Maker00016032 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-17, nbisL1-mrna-1795, nbisL1-mrna-8593 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-10229, nbisL1-mrna-22377, nbisL1-mrna-23034 |
| Salicaceae | Populus euphratica | 4 | populus_peu04529, populus_peu04548, populus_peu13119 ... |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132617513, gene-LOC132636948, gene-LOC132640884 |
| Solanaceae | Solanum chilense | 3 | SOLCI000083800, SOLCI001374300, SOLCI007146300 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107007564, gene-LOC107025958, gene-LOC107026013 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.21931_chr08_-, STRG.32258_chr09_+ |
| Tamaricaceae | Tamarix chinensis | 2 | TC02G1419, TC05G2113 |
| Zosteraceae | Zostera marina | 2 | Zosma02g16850.v3.1, Zosma06g28310.v3.1 |