Basic Information
Locus ID:
nbisL1-mrna-17330
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000000F_pilon | 3908854 | 3909876 | - | nbisL1-mrna-17330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.84 | 23,820.50 Da | 41.45 | 85.05 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 45 | 171 | 1.15E-18 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 27 | 109 | 2.6E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 188 | 1.5E-7 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31250.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031255130.1 | probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Pistacia vera] | 0 |
| C0LGR9 | Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana OX=3702 GN=At4g31250 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6M2FA21 | Protein kinase domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.1104.V1.1 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-8250 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17330 |